Publications

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86 Publications visible to you, out of a total of 86

Scalable Methods for Post-Processing, Visualizing, and Analyzing Phylogenetic Placements

Computational Molecular Evolution

Abstract

Not specified

Authors: Lucas Czech, Alexandros Stamatakis

Date Published: 2018

Publication Type: Journal

Citation: bioRxiv, p. 346353

Created: 7th Sep 2019 at 12:04, Last updated: 5th Mar 2024 at 21:23

ParGenes: a tool for massively parallel model selection and phylogenetic tree inference on thousands of genes.

Computational Molecular Evolution

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Abstract

Not specified

Authors: Benoit Morel, Alexey M Kozlov, Alexandros Stamatakis

Date Published: 2018

Publication Type: Journal

DOI: 10.1093/bioinformatics/bty839

Citation: Bioinformatics 35(10):1771-1773

Created: 7th Sep 2019 at 12:04, Last updated: 5th Mar 2024 at 21:23

Population and Evolutionary Genetic Inferences in the Whole-Genome Era: Software Challenges

Computational Molecular Evolution

Abstract

Not specified

Author: Alexandros Stamatakis

Date Published: 2018

Publication Type: InCollection

Citation: In Population Genomics, Springer

Created: 7th Sep 2019 at 12:04, Last updated: 5th Mar 2024 at 21:23

Compressing Streams of Phylogenetic Trees

Computational Molecular Evolution

Abstract

Not specified

Authors: Axel Trefzer, Alexandros Stamatakis

Date Published: 2018

Publication Type: Journal

Citation: bioRxiv, p. 440644

Created: 7th Sep 2019 at 12:04, Last updated: 5th Mar 2024 at 21:23

RAxML-NG: A fast, scalable, and user-friendly tool for maximum likelihood phylogenetic inference

Computational Molecular Evolution

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Abstract

Not specified

Authors: Alexey Kozlov, Diego Darriba, Tomas Flouri, Benoit Morel, Alexandros Stamatakis

Date Published: 2018

Publication Type: Journal

Citation: bioRxiv, p. 447110

Created: 7th Sep 2019 at 12:04, Last updated: 5th Mar 2024 at 21:23

A novel heuristic for data distribution in massively parallel phylogenetic inference using site repeats

Computational Molecular Evolution

Abstract

Not specified

Authors: Benoit Morel, Tomas Flouri, Alexandros Stamatakis

Date Published: 1st Dec 2017

Publication Type: InProceedings

Citation: In Proceedings of 19th Conference on High Performance Computing and Communications (HPCC), Bangkok, Thailand., IEEE, Dec 2017

Created: 7th Sep 2019 at 10:33, Last updated: 5th Mar 2024 at 21:23

A Critical Review on the Use of Support Values in Tree Viewers and Bioinformatics Toolkits

Computational Molecular Evolution

Abstract

Not specified

Authors: Lucas Czech, Jaime Huerta-Cepas, Alexandros Stamatakis

Date Published: 22nd Mar 2017

Publication Type: Journal

DOI: 10.1093/molbev/msx055

Citation: Molecular Biology and Evolution 34(6):1535-1542

Created: 7th Sep 2019 at 07:48, Last updated: 5th Mar 2024 at 21:23

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