ModelTest-NG: A New and Scalable Tool for the Selection of DNA and Protein Evolutionary Models

Abstract:

ModelTest-NG is a reimplementation from scratch of jModelTest and ProtTest, two popular tools for selecting the best-fit nucleotide and amino acid substitution models, respectively. ModelTest-NG is one to two orders of magnitude faster than jModelTest and ProtTest but equally accurate and introduces several new features, such as ascertainment bias correction, mixture, and free-rate models, or the automatic processing of single partitions. ModelTest-NG is available under a GNU GPL3 license at https://github.com/ddarriba/modeltest , last accessed September 2, 2019.

SEEK ID: https://publications.h-its.org/publications/478

DOI: 10.1093/molbev/msz189

Research Groups: Computational Molecular Evolution

Publication type: Journal

Journal: Molecular Biology and Evolution

Citation: Molecular Biology and Evolution 37(1):291-294

Date Published: 21st Aug 2019

Registered Mode: imported from a bibtex file

Authors: Diego Darriba, David Posada, Alexey M Kozlov, Alexandros Stamatakis, Benoit Morel, Tomas Flouri

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Citation
Darriba, D., Posada, D., Kozlov, A. M., Stamatakis, A., Morel, B., & Flouri, T. (2019). ModelTest-NG: A New and Scalable Tool for the Selection of DNA and Protein Evolutionary Models. In K. Crandall (Ed.), Molecular Biology and Evolution (Vol. 37, Issue 1, pp. 291–294). Oxford University Press (OUP). https://doi.org/10.1093/molbev/msz189
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Created: 22nd Oct 2019 at 10:28

Last updated: 5th Mar 2024 at 21:23

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