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57 Publications visible to you, out of a total of 57
The Human Physiome: how standards, software, and innovative service infrastructures are providing the building blocks to make it achievable.

Abstract

Not specified

Authors: David Nickerson, Koray Atalag, Bernard de Bono, Jörg Geiger, Carole Goble, Susanne Hollmann, Joachim Lonien, Wolfgang Müller, Babette Regierer, Natalie J. Stanford, Martin Golebiewski, Peter Hunter

Date Published: 6th Apr 2016

Publication Type: Journal

NORM-SYS - harmonizing standardization processes for model and data exchange in systems biology

Abstract

Not specified

Authors: Babette Regierer, Susanne Hollmann, Martin Golebiewski

Date Published: 9th Feb 2016

Publication Type: Journal

FAIRDOM approach for semantic interoperability of systems biology data and models.

Abstract

Not specified

Authors: O. Krebs, K. Wolstencroft, NJ. Stanford, N. Morrison, M. Golebiewski, S. Owen, Q. Nguyen, JL. Snoep, W. Müller, C. Goble

Date Published: 2016

Publication Type: Journal

Specifications of Standards in Systems and Synthetic Biology: Status and Developments in 2016

Abstract

Not specified

Authors: F. Schreiber, GD. Bader, P. Gleeson, M. Golebiewski, M. Hucka, Novère. Le, CJ. Myers, D. Nickerson, B. Sommer, D. Waltemath

Date Published: 2016

Publication Type: Journal

SEEK: a systems biology data and model management platform

Abstract (Expand)

Systems biology research typically involves the integration and analysis of heterogeneous data types in order to model and predict biological processes. Researchers therefore require tools and resources … to facilitate the sharing and integration of data, and for linking of data to systems biology models.

Authors: Katherine Wolstencroft, Stuart Owen, Olga Krebs, Quyen Nguyen, Natalie J Stanford, Martin Golebiewski, Andreas Weidemann, Meik Bittkowski, Lihua An, David Shockley, Jacky L. Snoep, Wolfgang Mueller, Carole Goble

Date Published: 1st Dec 2015

Publication Type: Journal

Specifications of Standards in Systems and Synthetic Biology

Abstract

Not specified

Authors: Falk Schreiber, Gary D. Bader, Martin Golebiewski, Michael Hucka, Benjamin Kormeier, Nicolas Le Novère, Chris Myers, David Nickerson, Björn Sommer, Dagmar Waltemath, Stephan Weise

Date Published: 1st Jun 2015

Publication Type: Journal

Promoting coordinated development of community-based information standards for modeling in biology: the COMBINE initiative

Abstract (Expand)

The Computational Modeling in Biology Network (COMBINE) is a consortium of groups involved in the development of open community standards and formats used in computational modeling in biology. COMBINE’s … aim is to act as a coordinator, facilitator, and resource for different standardization efforts whose domains of use cover related areas of the computational biology space. In this perspective article, we summarize COMBINE, its general organization, and the community standards and other efforts involved in it. Our goals are to help guide readers toward standards that may be suitable for their research activities, as well as to direct interested readers to relevant communities where they can best expect to receive assistance in how to develop interoperable computational models.

Authors: Michael Hucka, David Phillip Nickerson, Gary Bader, Frank T Bergmann, Jonathan Cooper, Emek Demir, Alan Garny, Martin Golebiewski, Chris John Myers, Falk Schreiber, Dagmar Waltemath, Nicolas Le Novère

Date Published: 24th Feb 2015

Publication Type: Journal

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