Publications

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1701 Publications visible to you, out of a total of 1701

Abstract

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Authors: Branimir Bertoša, Biserka Kojić-Prodić, Rebecca C. Wade, Sanja Tomić

Date Published: 2008

Publication Type: Journal

Abstract

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Authors: Branimir Bertoša, Biserka Kojić-Prodić, Rebecca C. Wade, Sanja Tomić

Date Published: 2008

Publication Type: Journal

Abstract (Expand)

Abstract Molecular recognition is critical to many fundamental processes in biology, including enzymatic reactions, signal transduction, genetic information processing, as well as molecular and cellular transport. The question of how proteins selectively recognize and correctly associate with their partners is an active research problem. For many proteins, experimental information about the structures of their molecular complexes and the details of their interactions are lacking. Macromolecular, structure-based computational techniques provide a means to predict the interactions of proteins and to investigate their recognition mechanisms. Here, we first discuss the general mechanism of molecular recognition as a multistep process from diffusion of one molecule toward the second to tight complex formation. We then describe the main forces and the physical properties that govern biomolecular interactions and introduce the principles of modeling them. Finally, simulation methods and computational approaches for molecular docking are briefly presented.

Authors: Anna Feldman-Salit, Rebecca C. Wade

Date Published: 14th Dec 2007

Publication Type: InBook

Abstract

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Author: Rebecca C. Wade

Date Published: 12th Dec 2007

Publication Type: InBook

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Authors: Simone Löscher, Lennart Schwartz, Matthias Stein, Sascha Ott, Michael Haumann

Date Published: 1st Dec 2007

Publication Type: Journal

Abstract (Expand)

This paper briefly describes the SABIO-RK database model for the storage of reaction kinetics information and the guidelines followed within the SABIO-RK project to annotate the kinetic data. Such annotations support the definition of cross links to other related databases and augment the semantics of the data stored in the database.

Authors: I. Rojas, M. Golebiewski, R. Kania, O. Krebs, S. Mir, A. Weidemann, U. Wittig

Date Published: 14th Sep 2007

Publication Type: Journal

Abstract

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Authors: Gerriet Eilers, Lennart Schwartz, Matthias Stein, Giuseppe Zampella, Luca de Gioia, Sascha Ott, Reiner Lomoth

Date Published: 27th Aug 2007

Publication Type: Journal

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