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1579 Publications visible to you, out of a total of 1579
Perturbation Methods in Molecular Dynamics Simulations with Implicit Solvent Models

Abstract

Not specified

Author: Tim I. Johann

Date Published: 2005

Publication Type: Diplom Thesis

The Protein Structure Annotation Tool ProSAT2

Abstract

Not specified

Author: Stefan Ulbrich

Date Published: 2005

Publication Type: Misc

Web-based visualisation of the transcriptional control network of Escherichia coli.

Abstract (Expand)

Transcription is one of the basic processes of gene expression, controlled by a complex network of biochemical reactions. Despite its importance, most work on the visualisation of biochemical networks … focuses on the representation of metabolic pathways. The visualisation of the complex networks controlling transcription requires the implementation of a hierarchical approach that allows the display of the structure of each regulatory region with its transcription factors and regulated operons. This paper presents a web-based application for the visualisation of transcriptional control networks. It takes as case study the organism Escherichia coli. The definition of the visual components implemented is mainly based on those proposed by Shen-Orr et al., 2002, slightly extended to visualise complex networks.

Authors: N. Sosa, A. Kremling, E. Ratsch, I. Rojas

Date Published: 28th Oct 2004

Publication Type: Journal

LUCIFER status report, summer 2004

Abstract

Not specified

Authors: Holger Mandel, Immo Appenzeller, Walter Seifert, Harald Baumeister, Peter Bizenberger, Ralf-Juergen Dettmar, Hans Gemperlein, Bernhard Grimm, Tom M. Herbst, Reiner Hofmann, Marcus Jutte, Werner Laun, Michael Lehmitz, Sebastiano Ligori, Rainer Lenzen, Kai Polsterer, Ralf-Rainer Rohloff, Andreas Schuetze, Andreas Seltmann, Peter Weiser, Harald Weisz, Wenli Xu

Date Published: 30th Sep 2004

Publication Type: Journal

The cryogenic MOS unit for LUCIFER

Abstract

Not specified

Authors: Reiner Hofmann, Hans Gemperlein, Bernhard Grimm, Marcus Jutte, Holger Mandel, Kai Polsterer, Harald Weisz

Date Published: 30th Sep 2004

Publication Type: Journal

The development process of the LUCIFER control software

Abstract

Not specified

Authors: Marcus Juette, Kai L. Polsterer, Michael Lehmitz, Volker Knierim

Date Published: 15th Sep 2004

Publication Type: Journal

Notes on the use of ontologies in the biochemical domain.

Abstract (Expand)

In this paper we aim at presenting the main flavours and uses that are given to the term ontology in the bio-domains. The paper does not intend to be a thorough review of the existing work in the area. … It highlights the uses that are given to ontologies in the Scientific Databases and Visualisation Group at EML Research, in Heidelberg.

Authors: I. Rojas, E. Ratsch, J. Saric, U. Wittig

Date Published: 20th Apr 2004

Publication Type: Journal

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