Bond dissociation energies of X–H bonds in proteins

Abstract:

Knowledge of reliable X−H bond dissociation energies (X = C, N, O, S) for amino acids in proteins is key for studying the radical chemistry of proteins. X−H bond dissociation energies of model dipeptides were computed using the isodesmic reaction method at the BMK/6-31+G(2df,p) and G4(MP2)-6X levels of theory. The density functional theory values agree well with the composite- level calculations. By this high level of theory, combined with a careful choice of reference compounds and peptide model systems, our work provides a highly valuable data set of bond dissociation energies with unprecedented accuracy and comprehensiveness. It will likely prove useful to predict protein biochemistry involving radicals, e.g., by machine learning.

SEEK ID: https://publications.h-its.org/publications/1506

DOI: 10.1039/D2RA04002F

Research Groups: Molecular Biomechanics

Publication type: Journal

Journal: RSC Advances

Publisher: Royal Society of Chemistry (RSC)

Citation: RSC Advances,12(53):34557-34564

Date Published: 1st Dec 2022

URL: https://doi.org/10.1039/D2RA04002F

Registered Mode: manually

Authors: Authors Wojtek Treyde, Kai Riedmiller, Frauke Gräter

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Citation
Treyde, W., Riedmiller, K., & Gräter, F. (2022). Bond dissociation energies of X–H bonds in proteins. In RSC Advances (Vol. 12, Issue 53, pp. 34557–34564). Royal Society of Chemistry (RSC). https://doi.org/10.1039/d2ra04002f
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Created: 8th Aug 2022 at 14:31

Last updated: 5th Mar 2024 at 21:24

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