Knowledge of reliable X−H bond dissociation energies (X = C, N, O, S) for amino acids in proteins is key for studying the radical chemistry of proteins. X−H bond dissociation energies of model dipeptides were computed using the isodesmic reaction method at the BMK/6-31+G(2df,p) and G4(MP2)-6X levels of theory. The density functional theory values agree well with the composite- level calculations. By this high level of theory, combined with a careful choice of reference compounds and peptide model systems, our work provides a highly valuable data set of bond dissociation energies with unprecedented accuracy and comprehensiveness. It will likely prove useful to predict protein biochemistry involving radicals, e.g., by machine learning.
SEEK ID: https://publications.h-its.org/publications/1506
DOI: 10.1039/D2RA04002F
Research Groups: Molecular Biomechanics
Publication type: Journal
Journal: RSC Advances
Publisher: Royal Society of Chemistry (RSC)
Citation: RSC Advances,12(53):34557-34564
Date Published: 1st Dec 2022
URL: https://doi.org/10.1039/D2RA04002F
Registered Mode: manually
Views: 3262
Created: 8th Aug 2022 at 14:31
Last updated: 5th Mar 2024 at 21:24
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