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91 Publications visible to you, out of a total of 91
Dynamic disorder can explain non-exponential kinetics of fast protein mechanical unfolding

Abstract

Not specified

Author: S Sturm BI Costescu

Date Published: 2017

Publication Type: Journal

In silico design of the first DNA-independent mechanism-based inhibitor of mammalian DNA methyltransferase Dnmt1

Abstract

Not specified

Authors: V Miletić, I Odorčić, P Nikolić, ŽM Svedružić

Date Published: 2017

Publication Type: Journal

Single molecule force spectroscopy data and BD- and MD simulations on the blood protein von Willebrand factor.

Abstract (Expand)

We here give information for a deeper understanding of single molecule force spectroscopy (SMFS) data through the example of the blood protein von Willebrand factor (VWF). It is also shown, how fitting … of rupture forces versus loading rate profiles in the molecular dynamics (MD) loading-rate range can be used to demonstrate the qualitative agreement between SMFS and MD simulations. The recently developed model by Bullerjahn, Sturm, and Kroy (BSK) was used for this demonstration. Further, Brownian dynamics (BD) simulations, which can be utilized to estimate the lifetimes of intramolecular VWF interactions under physiological shear, are described. For interpretation and discussion of the methods and data presented here, we would like to directly point the reader to the related research paper, "Mutual A domain interactions in the force sensing protein von Willebrand Factor"

Authors: Sandra Posch, Camilo Aponte-Santamaría, Richard Schwarzl, Andreas Karner, Matthias Radtke, Frauke Gräter, Tobias Obser, Gesa König, Maria A. Brehm, Hermann J. Gruber, Roland R. Netz, Carsten Baldauf, Reinhard Schneppenheim, Robert Tampé, Peter Hinterdorfer

Date Published: 21st Jul 2016

Publication Type: Journal

The Cell Wall Arabinose-Deficient Arabidopsis thaliana Mutant murus5 Encodes a Defective Allele of REVERSIBLY GLYCOSYLATED POLYPEPTIDE2

Abstract

Not specified

Authors: Christopher K. Dugard, Rachel A. Mertz, Catherine Rayon, Davide Mercadante, Christopher Hart, Matheus R. Benatti, Anna T. Olek, Phillip J. SanMiguel, Bruce R. Cooper, Wolf-Dieter Reiter, Maureen C. McCann, Nicholas C. Carpita

Date Published: 6th Jul 2016

Publication Type: Journal

von Willebrand factor is dimerized by protein disulfide isomerase

Abstract

Not specified

Authors: Svenja Lippok, Katra Kolšek, Achim Löf, Dennis Eggert, Willem Vanderlinden, Jochen P. Müller, Gesa König, Tobias Obser, Karoline Röhrs, Sonja Schneppenheim, Ulrich Budde, Carsten Baldauf, Camilo Aponte-Santamaría, Frauke Gräter, Reinhard Schneppenheim, Joachim O. Rädler, Maria A. Brehm

Date Published: 3rd Mar 2016

Publication Type: Journal

Rescuing the Over-Collapse of Intrinsically Disordered Proteins using a Force Field Derived by a New Paradigm

Abstract

Not specified

Authors: Davide Mercadante, Sigrid Milles, Gustavo Fuertes, Dmitri Svergun, Edward A Lemke, Frauke Gräter

Date Published: 2016

Publication Type: Journal

Plasticity of Nucleoporin Nuclear Transport Receptor Interactions-Molecular Description of a Highly Dynamic, Ultrafast Interaction Mechanism

Abstract

Not specified

Authors: Iker Valle Aramburu, Davide Mercadante, Sigrid Milles, Malene Ringkjøbing, Niccolò Banterle, Christine Koehler, Swati Tyagi, Jane Clarke, Sarah L Shammas, Martin Blackledge, others

Date Published: 2016

Publication Type: Journal

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